IRIS-HEP Fellow: Dmytro Horyslavets
Fellowship dates: Jul – Sep, 2022
Home Institution: Kyiv Academic University
Project: Sequence-read extraction from counting de Bruijn graphsWe will extend the MetaGraph framework by adding the sequence-read extraction option from the counting de Bruijn graphs. Hence given a sequence search result, all reads that overlap the parts of the graph that matched could be extracted and used in further downstream analysis.
More information: My project proposal
Andre Kahles (University of Zurich)
- 19 Oct 2022 - "Sequence-read extraction from counting de Bruijn graphs", Dmytro Horyslavets, IRIS-HEP Fellows Presentations 2022 Recording: Sequence-read extraction from counting de Bruijn graphs